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reaction rate scalings from BioNetGen #5

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isaacsas opened this issue Feb 27, 2019 · 0 comments
Open

reaction rate scalings from BioNetGen #5

isaacsas opened this issue Feb 27, 2019 · 0 comments

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@isaacsas
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isaacsas commented Feb 27, 2019 •
edited

DiffEqBio rescales ODE/SSA rates by factorials, but these seem to already be included in the BioNetGen rates/expressions.

  • The fix incorporated for the BCR network needs to be tested more generally on > second order reactions.
  • It also should be noted somewhere that the rescaling is done in the reaction definition (i.e. 2*k, A+A -->B and not in the definition of the rate k.
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