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NAMESPACE
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NAMESPACE
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export(phewas, mapICD9ToPhecodes, mapPhecodesToExclusions, createPhewasTable, phenotypePlot,
phewasManhattan, phenotypeManhattan, generateExample, phewasMeta, phewasMetaModels,
restrictPhecodesBySex, addPhecodeInfo, addPhewasDescription, addPhewasGroups,
mapPheWAStoExclusions, mapICD9toPheWAS, plinkPhewasExport, phewasDT, phewas_ext,
createPhenotypes, mapCodesToPhecodes)
import(dplyr,tidyr, ggplot2, parallel)
importFrom(MASS,mvrnorm)
importFrom(meta,metagen)
importFrom(ggrepel,geom_text_repel)
importFrom(DT,datatable)
importFrom(survival,clogit,strata,coxph,Surv)
importFrom(logistf,logistf)
importFrom(lmtest,lrtest)
importFrom("stats", "aggregate", "as.formula", "binomial",
"chisq.test", "confint", "contrasts", "contrasts<-", "cor",
"glm", "lm", "model.matrix", "na.omit", "p.adjust",
"pchisq", "qnorm", "rpois", "t.test", "terms")
importFrom("utils", "write.table")