{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":563439188,"defaultBranch":"main","name":"wdl-dockerfiles","ownerLogin":"PacificBiosciences","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2022-11-08T16:03:28.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/999745?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1715703707.0","currentOid":""},"activityList":{"items":[{"before":"2240d2547a831a9a7f9c0e2754b484f4267a03f3","after":"7c4610e35727dd4b686d5533da088b35f9b1a707","ref":"refs/heads/develop","pushedAt":"2024-05-14T17:02:24.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"},"commit":{"message":"Added deepvariant and deepvariant-gpu images.","shortMessageHtmlLink":"Added deepvariant and deepvariant-gpu images."}},{"before":"6177ae9dc06e6ea7583ec68c1ad4cc4c2be2e2a1","after":"2240d2547a831a9a7f9c0e2754b484f4267a03f3","ref":"refs/heads/develop","pushedAt":"2024-05-14T17:00:56.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"},"commit":{"message":"Added deepvariant and deepvariant-gpu images.","shortMessageHtmlLink":"Added deepvariant and deepvariant-gpu images."}},{"before":"4a4cec589556998211063d52811ac6bb96943032","after":null,"ref":"refs/heads/feature/te-updates","pushedAt":"2024-05-14T16:21:47.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"}},{"before":"0a814a105c5812a88a002642b0ae6810b5fcd20f","after":null,"ref":"refs/heads/feature/svpack-tag-only-affected","pushedAt":"2024-05-14T16:21:36.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"}},{"before":"5298a2ae47c075bd76a3799c3afca8f995dbab18","after":null,"ref":"refs/heads/feature/pangu-0.2.6","pushedAt":"2024-05-14T16:21:30.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"}},{"before":"47c45efe63a29379f31d5b6e46ce6d4110b4263e","after":null,"ref":"refs/heads/feature/paraphase-3.1.0","pushedAt":"2024-05-14T16:21:29.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"}},{"before":"a6bf7e5a01956e175da3cd8b14dd707d97b08e7e","after":"6177ae9dc06e6ea7583ec68c1ad4cc4c2be2e2a1","ref":"refs/heads/develop","pushedAt":"2024-05-14T16:19:06.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"},"commit":{"message":"Added deepvariant and deepvariant-gpu images.","shortMessageHtmlLink":"Added deepvariant and deepvariant-gpu images."}},{"before":"48f2d9f2f51b4a17144c1630d155621cca9efd41","after":"a6bf7e5a01956e175da3cd8b14dd707d97b08e7e","ref":"refs/heads/develop","pushedAt":"2024-05-14T16:13:25.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"},"commit":{"message":"Moved glnexus and pharmcat to mirror dir.","shortMessageHtmlLink":"Moved glnexus and pharmcat to mirror dir."}},{"before":"238ba70146d11f636963f9bcec36a2bb881c0bfa","after":"48f2d9f2f51b4a17144c1630d155621cca9efd41","ref":"refs/heads/develop","pushedAt":"2024-05-14T15:49:16.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"},"commit":{"message":"Added pharmcat.","shortMessageHtmlLink":"Added pharmcat."}},{"before":"6b13cc246dd44e41903d17a660bb5432cdd18dbe","after":null,"ref":"refs/heads/feature/base-image","pushedAt":"2024-05-14T15:19:32.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"}},{"before":"8f3fef85fc958e9d74d5a42785fdd3cc26131fa7","after":"238ba70146d11f636963f9bcec36a2bb881c0bfa","ref":"refs/heads/develop","pushedAt":"2024-05-14T15:19:19.000Z","pushType":"pr_merge","commitsCount":25,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"},"commit":{"message":"Merge pull request #51 from PacificBiosciences/feature/base-image\n\nFeature: Establish a base image to simplify builds, and move most images to this base.","shortMessageHtmlLink":"Merge pull request #51 from PacificBiosciences/feature/base-image"}},{"before":null,"after":"8f3fef85fc958e9d74d5a42785fdd3cc26131fa7","ref":"refs/heads/develop","pushedAt":"2024-05-14T15:16:22.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"},"commit":{"message":"Merge pull request #50 from PacificBiosciences/feature/trgt-0.9.0\n\nUpdated to trgt 0.9.0","shortMessageHtmlLink":"Merge pull request #50 from PacificBiosciences/feature/trgt-0.9.0"}},{"before":"1f5ed5b8c9f797cb73be8565dc26c8094b28e77d","after":"6b13cc246dd44e41903d17a660bb5432cdd18dbe","ref":"refs/heads/feature/base-image","pushedAt":"2024-05-10T22:46:22.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"},"commit":{"message":"Add python-is-python3 to pb_wdl_base:build2 and rebuild images.","shortMessageHtmlLink":"Add python-is-python3 to pb_wdl_base:build2 and rebuild images."}},{"before":"3c19d07381235f18cfba62b276fffa9a401b0267","after":"1f5ed5b8c9f797cb73be8565dc26c8094b28e77d","ref":"refs/heads/feature/base-image","pushedAt":"2024-05-08T06:08:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"},"commit":{"message":"Fix path for cpic db in pbstarphase image.","shortMessageHtmlLink":"Fix path for cpic db in pbstarphase image."}},{"before":"4220a924118a5522103527691817a4bad4996344","after":"3c19d07381235f18cfba62b276fffa9a401b0267","ref":"refs/heads/feature/base-image","pushedAt":"2024-05-07T16:18:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"},"commit":{"message":"fix trgt image creation","shortMessageHtmlLink":"fix trgt image creation"}},{"before":"60bf6e18655cb80075256a308e87c5c53d2ca87d","after":"4220a924118a5522103527691817a4bad4996344","ref":"refs/heads/feature/base-image","pushedAt":"2024-05-07T00:51:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"},"commit":{"message":"Update wgs_tertiary image.","shortMessageHtmlLink":"Update wgs_tertiary image."}},{"before":"873ab7435a56eb46e34240da906ccc3188023ef2","after":null,"ref":"refs/heads/feature/tertiary_containers","pushedAt":"2024-05-07T00:48:29.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"}},{"before":"2689a908ccd2b62d199406472e195a934fde6659","after":"60bf6e18655cb80075256a308e87c5c53d2ca87d","ref":"refs/heads/feature/base-image","pushedAt":"2024-05-07T00:48:25.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"},"commit":{"message":"Merge pull request #49 from PacificBiosciences/feature/tertiary_containers\n\nCreate an image preloaded with datasets required for HPO lookup. Relace yaml2ped with json2ped.","shortMessageHtmlLink":"Merge pull request #49 from PacificBiosciences/feature/tertiary_conta…"}},{"before":"207ce30e511f0f310f65383612740904cf0db776","after":"2689a908ccd2b62d199406472e195a934fde6659","ref":"refs/heads/feature/base-image","pushedAt":"2024-05-07T00:03:57.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"},"commit":{"message":"Updated slivar image and included slivar.js in /opt/scripts","shortMessageHtmlLink":"Updated slivar image and included slivar.js in /opt/scripts"}},{"before":"d6e5b10852f27dfce37b60549f1826c4bf55536a","after":"207ce30e511f0f310f65383612740904cf0db776","ref":"refs/heads/feature/base-image","pushedAt":"2024-05-06T23:59:13.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"},"commit":{"message":"Pinned base image in Dockerfiles to specific hash of pb_wdl_base.","shortMessageHtmlLink":"Pinned base image in Dockerfiles to specific hash of pb_wdl_base."}},{"before":"4d04b3ed4f56f247cd48eec61e59e059c3caeee3","after":"d6e5b10852f27dfce37b60549f1826c4bf55536a","ref":"refs/heads/feature/base-image","pushedAt":"2024-05-06T23:03:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"},"commit":{"message":"Added build counter to hifiasm-meta","shortMessageHtmlLink":"Added build counter to hifiasm-meta"}},{"before":"1a45d1bf200873a7e89d36d9685f2755a3107fca","after":"4d04b3ed4f56f247cd48eec61e59e059c3caeee3","ref":"refs/heads/feature/base-image","pushedAt":"2024-05-06T22:46:31.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"},"commit":{"message":"Update pangu to 0.2.8","shortMessageHtmlLink":"Update pangu to 0.2.8"}},{"before":"52bacabea35a93aaf09e9127f6d375f67d19e89e","after":"1a45d1bf200873a7e89d36d9685f2755a3107fca","ref":"refs/heads/feature/base-image","pushedAt":"2024-05-06T21:45:22.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"},"commit":{"message":"Added jellyfish image.","shortMessageHtmlLink":"Added jellyfish image."}},{"before":"e5eae10f4748b3c828900a54968534d2c28360a3","after":"52bacabea35a93aaf09e9127f6d375f67d19e89e","ref":"refs/heads/feature/base-image","pushedAt":"2024-05-03T06:01:16.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"},"commit":{"message":"formatting","shortMessageHtmlLink":"formatting"}},{"before":null,"after":"e5eae10f4748b3c828900a54968534d2c28360a3","ref":"refs/heads/feature/base-image","pushedAt":"2024-05-03T05:53:03.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"},"commit":{"message":"Updated svpack to use the new base image, and the new svpack tagzygosity functionality.","shortMessageHtmlLink":"Updated svpack to use the new base image, and the new svpack tagzygos…"}},{"before":null,"after":"0a814a105c5812a88a002642b0ae6810b5fcd20f","ref":"refs/heads/feature/svpack-tag-only-affected","pushedAt":"2024-04-25T03:47:08.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"},"commit":{"message":"Using fork of svpack where only affected samples are tagged for slivar.","shortMessageHtmlLink":"Using fork of svpack where only affected samples are tagged for slivar."}},{"before":"b90920f27f694e5587a10f90e008777a965e020b","after":"47c45efe63a29379f31d5b6e46ce6d4110b4263e","ref":"refs/heads/feature/paraphase-3.1.0","pushedAt":"2024-04-19T00:26:51.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"},"commit":{"message":"Update Paraphase to 3.1.1\n\nsha256:fe7091e74138562022f84c112fbeef78f7f1040c7f67b46a92b3c16403e55969","shortMessageHtmlLink":"Update Paraphase to 3.1.1"}},{"before":null,"after":"b90920f27f694e5587a10f90e008777a965e020b","ref":"refs/heads/feature/paraphase-3.1.0","pushedAt":"2024-04-17T21:04:46.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"},"commit":{"message":"Upgrade to Paraphase v3.1\n\nsha256:04e9c2a051f4ee9d7e917f5bd61b91d6e22824f2b4771bbb3b9ab616d3fad583","shortMessageHtmlLink":"Upgrade to Paraphase v3.1"}},{"before":"164cfd47a90cb5c0fbaeed9392c731d45730239c","after":null,"ref":"refs/heads/feature/trgt-0.9.0","pushedAt":"2024-04-17T03:44:07.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"}},{"before":"34ed80e8591e6a17931e2d20360c3fb77af83582","after":"8f3fef85fc958e9d74d5a42785fdd3cc26131fa7","ref":"refs/heads/main","pushedAt":"2024-04-17T03:44:02.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"williamrowell","name":"Billy Rowell","path":"/williamrowell","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/627365?s=80&v=4"},"commit":{"message":"Merge pull request #50 from PacificBiosciences/feature/trgt-0.9.0\n\nUpdated to trgt 0.9.0","shortMessageHtmlLink":"Merge pull request #50 from PacificBiosciences/feature/trgt-0.9.0"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAESbgUtgA","startCursor":null,"endCursor":null}},"title":"Activity · PacificBiosciences/wdl-dockerfiles"}