/
author_dict.py
154 lines (112 loc) · 4.18 KB
/
author_dict.py
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##create author dictionary
pub_authors=[]
##f=open(r'C:\Users\Jordan Anaya\Desktop\prepub\figshare\figshare.txt')
##figshare=[eval(i.strip()) for i in f]
##for i in figshare:
## for author in i[1]:
## pub_authors.append(author)
f=open(r'C:\Users\Jordan Anaya\Desktop\prepub\peerj\peerj.txt')
peerj=[eval(i.strip()) for i in f]
for i in peerj:
for author in i[1]:
pub_authors.append(author)
f=open(r'C:\Users\Jordan Anaya\Desktop\prepub\biorxiv\biorxiv.txt')
biorxiv=[eval(i.strip()) for i in f]
for i in biorxiv:
for author in i[1]:
pub_authors.append(author)
f=open(r'C:\Users\Jordan Anaya\Desktop\prepub\f1000research\f1000research.txt')
f1000research=[eval(i.strip()) for i in f]
for i in f1000research:
for author in i[1]:
pub_authors.append(author)
f=open(r'C:\Users\Jordan Anaya\Desktop\prepub\arxiv\arxiv.txt')
arxiv=[eval(i.strip()) for i in f]
for i in arxiv:
for author in i[1]:
pub_authors.append(author)
f=open(r'C:\Users\Jordan Anaya\Desktop\prepub\winnower\winnower.txt')
winnower=[eval(i.strip()) for i in f]
for i in winnower:
for author in i[1]:
pub_authors.append(author)
f=open(r'C:\Users\Jordan Anaya\Desktop\prepub\preprints\preprints.txt')
preprints=[eval(i.strip()) for i in f]
for i in preprints:
for author in i[1]:
pub_authors.append(author)
f=open(r'C:\Users\Jordan Anaya\Desktop\prepub\wellcome\wellcome.txt')
wellcome=[eval(i.strip()) for i in f]
for i in wellcome:
for author in i[1]:
pub_authors.append(author)
f=open(r'C:\Users\Jordan Anaya\Desktop\prepub\nature\nature.txt')
nature=[eval(i.strip()) for i in f]
for i in nature:
for author in i[1]:
pub_authors.append(author)
def middle_function(name):
if name=='':
return ''
else:
return name[0]
##this is for abb, needed
def first_function(name):
try:
if '-' in name:
name_split=name.split('-')
return name_split[0][0]+name_split[1][0]
else:
return name[0]
except:
return ''
##i'm changing unique to include full first name 2016 04 19
##actually, need two unique lists, one for first name and one for last name
name_first={}
name_last={}
unique_last={}
unique_first={}
for i in pub_authors:
i=i.replace(',','').replace('.','').lower()
if i!='':
if i[:3]=='jr ':
i=i[3:]
if i[-3:]==' jr':
i=i[:-3]
if i[:3]=='sr ':
i=i[3:]
if i[-3:]==' sr':
i=i[:-3]
last_name=i.split()[-1]
if len(i.split())==1:
first_name=''
middle_name=''
elif len(i.split())==2:
first_name=i.split()[0]
middle_name=''
else:
first_name=i.split()[0]
middle_name=i.replace(first_name+' ','').replace(' '+last_name,'').strip()
##need separate unique dictionaries
myauthor_first=(last_name,first_name,middle_function(middle_name))
myauthor_last=(last_name,first_function(first_name),middle_function(middle_name))
if myauthor_first not in unique_first:
unique_first[(last_name,first_name,middle_function(middle_name))]=''
name_first[first_name]=[name_first.get(first_name,[[],[]])[0]+[last_name],\
name_first.get(first_name,[[],[]])[1]+[middle_function(middle_name)]]
if myauthor_last not in unique_last:
unique_last[(last_name,first_function(first_name),middle_function(middle_name))]=''
name_last[last_name]=[name_last.get(last_name,[[],[]])[0]+[first_function(first_name)],\
name_last.get(last_name,[[],[]])[1]+[middle_function(middle_name)]]
f=open(r'C:\Users\Jordan Anaya\Desktop\prepub\papers\unique_last.py','w')
f.write('unique_last='+str(unique_last))
f.close()
f=open(r'C:\Users\Jordan Anaya\Desktop\prepub\papers\unique_first.py','w')
f.write('unique_first='+str(unique_first))
f.close()
f=open(r'C:\Users\Jordan Anaya\Desktop\prepub\papers\name_last.py','w')
f.write('name_last='+str(name_last))
f.close()
f=open(r'C:\Users\Jordan Anaya\Desktop\prepub\papers\name_first.py','w')
f.write('name_first='+str(name_first))
f.close()