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NextDenovo seems not working properly... #139
Comments
Nothing new since 3pm yesterday, but it keeps showing it's running... |
Have you run the test data successfully? |
Yes, I've run the test data. Successfully. |
with |
|
Could you paste the output of the |
. 5 directories, 6 files |
Could you try this testing, it seems this bug caused by |
Hi, |
Question or Expected behavior
NextDenovo seems to have stopped working
Operating system
Which operating system and version are you using?
Linux version 3.10.0-514.el7.x86_64 (builder@kbuilder.dev.centos.org) (gcc version 4.8.5 20150623 (Red Hat 4.8.5-11) (GCC) ) #1 SMP Tue Nov 22 16:42:41 UTC 2016
GCC
What version of GCC are you using?
gcc version 7.2.0 (GCC)
Python
What version of Python are you using?
Python 3.9.5
NextDenovo
What version of NextDenovo are you using?
nextDenovo v2.5.0
Additional context (Optional)
After the first stat job, it seems to stop running, there were no more files update, but the state of the job shows still running. I am not sure if it is a problem...
The file of nextDenovo.sh.done is empty. The run.cfg file's code as follows:
The nextdenovo_rundir/01.raw_align/01.db_stat.sh.work/db_stat1/nextDenovo.sh.e shows as follow:
The text was updated successfully, but these errors were encountered: