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export/save 3D mask do not work #8

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matfallet opened this issue Aug 18, 2021 · 0 comments
Open

export/save 3D mask do not work #8

matfallet opened this issue Aug 18, 2021 · 0 comments

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@matfallet
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matfallet commented Aug 18, 2021

Dear support, I used cellpose-napari on my 3D images (2048x2048x12 slices), only one color (dapi). It works perfectly ! But when I t save the output images (save all layers) with napari, the mask (32 bit) and the outlines are completely black in ImageJ (histogram min and max =0), but the other images are good(flow and cellprob) ? Do you have any explanation or way to export this 3D mask ? Thanks so much. Best, Mathieu

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