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This repository has been archived by the owner on Dec 11, 2022. It is now read-only.
Hello!
I get the following error while trying to ./install.sh :
vcf_file.cpp: In constructor ‘vcf_file::vcf_file()’:
vcf_file.cpp:25:13: error: cannot convert ‘bool’ to ‘gzFile {aka gzFile_s*}’ in assignment
gzvcf_in = false;
^~~~~
Makefile:53: recipe for target 'vcf_file.o' failed
make[1]: *** [vcf_file.o] Error 1
Could you please help me fix it?
Thanks!
The text was updated successfully, but these errors were encountered:
Hi Mr. Cadzow,
I was able to run the pipeline using an older version of Ubuntu to install it. However, I'm not sure the results I've obtained for the test data are correct. Particularly, the plots for iHS look very different from expected. The "CEUchr2.RData" file has also failed to generate.
Is there any possible way to address this problem? I have attached the log files here.
I'm mainly interested in calculating iHS and Fst.
Thanks! multi_population.log install.log
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Hello!
I get the following error while trying to ./install.sh :
vcf_file.cpp: In constructor ‘vcf_file::vcf_file()’:
vcf_file.cpp:25:13: error: cannot convert ‘bool’ to ‘gzFile {aka gzFile_s*}’ in assignment
gzvcf_in = false;
^~~~~
Makefile:53: recipe for target 'vcf_file.o' failed
make[1]: *** [vcf_file.o] Error 1
Could you please help me fix it?
Thanks!
The text was updated successfully, but these errors were encountered: