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Dtypewarning inherited from pandas #55

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MenaceGallagher opened this issue Aug 20, 2022 · 1 comment
Open

Dtypewarning inherited from pandas #55

MenaceGallagher opened this issue Aug 20, 2022 · 1 comment

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@MenaceGallagher
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When attempting to upload data following opening my own *.tsv file from DIA-NN the GUI will briefly indicate it is processing the data before hanging. Checking the cmd window the following warning is given:

pandas\io\parsers\c_parser_wrapper.py:404: DtypeWarning: Columns (2) have mixed types. Specify dtype option on import or set low_memory=False.
warnings.warn(warning_message, DtypeWarning, stacklevel=find_stack_level())

This error is reproducible using the test_diann_input.tsv file

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Version 0.1.10 installed via one-click GUI installer on Windows 11 Pro for Workstations (Version 10.0.22000 Build 22000)

@cjvonbuehler
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Unfortunately, I can confirm that this bug still exists (Win10, AlphaMap 1.10). Neither my own DIA-NN output.tsv nor the ones linked in the documentation work. Both produce the same error as described above. Is there hope to get this fixed?
Thanks a lot, Clemens.

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