{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":142321950,"defaultBranch":"main","name":"pyPESTO","ownerLogin":"ICB-DCM","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2018-07-25T15:51:29.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/17879961?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1716715160.0","currentOid":""},"activityList":{"items":[{"before":"698ab34c6bfe084aaa3dc1f886aad491196a8770","after":"4e43d675c7fdae1fc42288a9d131acdabc896028","ref":"refs/heads/prepare_release_0.5.2","pushedAt":"2024-05-29T16:18:35.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"FFroehlich","name":"Fabian Fröhlich","path":"/FFroehlich","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14923969?s=80&v=4"},"commit":{"message":"Merge branch 'develop' into prepare_release_0.5.2","shortMessageHtmlLink":"Merge branch 'develop' into prepare_release_0.5.2"}},{"before":"4222672d3d68bbb70c6f72d935e24eac3c3e346c","after":"0b8417fcbb783e9248190dacbfa430eacce17840","ref":"refs/heads/develop","pushedAt":"2024-05-29T16:18:10.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"FFroehlich","name":"Fabian Fröhlich","path":"/FFroehlich","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14923969?s=80&v=4"},"commit":{"message":"Fix JaxObjective (#1400)\n\n* Add pre_post_processor.setter and base_objective wrapper functions\r\n\r\n* fix docstring & simplify implementation\r\n\r\n* extend tests\r\n\r\n* fix tests\r\n\r\n* add returns to docstring\r\n\r\n* fix max sensi orders, add test\r\n\r\n---------\r\n\r\nCo-authored-by: Paul Jonas Jost <70631928+PaulJonasJost@users.noreply.github.com>\r\nCo-authored-by: Fabian Fröhlich \r\nCo-authored-by: Fabian Fröhlich ","shortMessageHtmlLink":"Fix JaxObjective (#1400)"}},{"before":"73faa379d3e81b2487dfd5805c1f0500102dfa7f","after":"698ab34c6bfe084aaa3dc1f886aad491196a8770","ref":"refs/heads/prepare_release_0.5.2","pushedAt":"2024-05-29T07:48:57.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"PaulJonasJost","name":"Paul Jonas Jost","path":"/PaulJonasJost","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/70631928?s=80&v=4"},"commit":{"message":"added #1400 to release.","shortMessageHtmlLink":"added #1400 to release."}},{"before":null,"after":"73faa379d3e81b2487dfd5805c1f0500102dfa7f","ref":"refs/heads/prepare_release_0.5.2","pushedAt":"2024-05-26T09:19:20.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"PaulJonasJost","name":"Paul Jonas Jost","path":"/PaulJonasJost","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/70631928?s=80&v=4"},"commit":{"message":"Update Changelog and Version","shortMessageHtmlLink":"Update Changelog and Version"}},{"before":"d578fa59635b3f79205c4dccfe06e282e81fb18b","after":null,"ref":"refs/heads/fix_optimization_summary","pushedAt":"2024-05-26T08:50:21.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"PaulJonasJost","name":"Paul Jonas Jost","path":"/PaulJonasJost","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/70631928?s=80&v=4"}},{"before":"77341e34a7c6e57fbc138ccd40a4e122cc56c35a","after":null,"ref":"refs/heads/Some_metadata","pushedAt":"2024-05-26T08:49:55.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"PaulJonasJost","name":"Paul Jonas Jost","path":"/PaulJonasJost","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/70631928?s=80&v=4"}},{"before":"fefefd53aa85bcaab8da182dfd79ce7d1e3707a0","after":"4222672d3d68bbb70c6f72d935e24eac3c3e346c","ref":"refs/heads/develop","pushedAt":"2024-05-26T08:49:51.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"PaulJonasJost","name":"Paul Jonas Jost","path":"/PaulJonasJost","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/70631928?s=80&v=4"},"commit":{"message":"Saves pypesto and python version to the problem. (#1382)\n\n* Saves pypesto and python version to the problem.\r\n\r\n* Update pypesto/problem/base.py\r\n\r\nCo-authored-by: Daniel Weindl \r\n\r\n---------\r\n\r\nCo-authored-by: Daniel Weindl ","shortMessageHtmlLink":"Saves pypesto and python version to the problem. (#1382)"}},{"before":"a66172c4f1cdd1af39d319a0e0c0b699b5941135","after":"de265536d7cd6a6f6a78cc72c7d5ecdebebcbfa4","ref":"refs/heads/fix_macos14_roadrunner","pushedAt":"2024-05-24T19:57:51.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"PaulJonasJost","name":"Paul Jonas Jost","path":"/PaulJonasJost","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/70631928?s=80&v=4"},"commit":{"message":"Merge branch 'fix_macos14_roadrunner' of https://github.com/ICB-DCM/pyPESTO into fix_macos14_roadrunner","shortMessageHtmlLink":"Merge branch 'fix_macos14_roadrunner' of https://github.com/ICB-DCM/p…"}},{"before":"61c62ef9893f20fe441a0190aa49aca6433ecee3","after":"778deca8dd64d47b6e7e9bad771ae8538ccf25fa","ref":"refs/heads/example_history_usage","pushedAt":"2024-05-21T18:50:50.000Z","pushType":"push","commitsCount":5,"pusher":{"login":"PaulJonasJost","name":"Paul Jonas Jost","path":"/PaulJonasJost","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/70631928?s=80&v=4"},"commit":{"message":"Merge branch 'develop' into example_history_usage","shortMessageHtmlLink":"Merge branch 'develop' into example_history_usage"}},{"before":"7013eeb8adcb083e56dddc2de45bcbd28f1cba2c","after":"77341e34a7c6e57fbc138ccd40a4e122cc56c35a","ref":"refs/heads/Some_metadata","pushedAt":"2024-05-21T18:50:22.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"PaulJonasJost","name":"Paul Jonas Jost","path":"/PaulJonasJost","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/70631928?s=80&v=4"},"commit":{"message":"Merge branch 'develop' into Some_metadata","shortMessageHtmlLink":"Merge branch 'develop' into Some_metadata"}},{"before":"71f069609d689bbf5b6254fcfacc84bcc3e041a6","after":"a66172c4f1cdd1af39d319a0e0c0b699b5941135","ref":"refs/heads/fix_macos14_roadrunner","pushedAt":"2024-05-21T18:50:04.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"PaulJonasJost","name":"Paul Jonas Jost","path":"/PaulJonasJost","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/70631928?s=80&v=4"},"commit":{"message":"Merge branch 'develop' into fix_macos14_roadrunner","shortMessageHtmlLink":"Merge branch 'develop' into fix_macos14_roadrunner"}},{"before":"bdd8873567f0ba323da379edd49f3fcacb10bf6c","after":null,"ref":"refs/heads/variational_inference","pushedAt":"2024-05-21T12:52:46.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"arrjon","name":"Jonas Arruda","path":"/arrjon","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69197639?s=80&v=4"}},{"before":"7fe40bace62a41bf4391be018aadc17370d08316","after":"fefefd53aa85bcaab8da182dfd79ce7d1e3707a0","ref":"refs/heads/develop","pushedAt":"2024-05-21T12:52:37.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"arrjon","name":"Jonas Arruda","path":"/arrjon","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69197639?s=80&v=4"},"commit":{"message":"Variational inference with PyMC (#1306)\n\n* variational inference fit\r\n\r\n* remove variational from sample\r\n\r\n* make pymc object accessible\r\n\r\n* save as McmcPtResult\r\n\r\n* tests added\r\n\r\n* add warning in write_result()","shortMessageHtmlLink":"Variational inference with PyMC (#1306)"}},{"before":"598977e98f733f37e01e6e867c974e41d5ed7fc2","after":"71f069609d689bbf5b6254fcfacc84bcc3e041a6","ref":"refs/heads/fix_macos14_roadrunner","pushedAt":"2024-05-16T15:37:20.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"PaulJonasJost","name":"Paul Jonas Jost","path":"/PaulJonasJost","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/70631928?s=80&v=4"},"commit":{"message":"more print problem is definitely with steady state computation","shortMessageHtmlLink":"more print problem is definitely with steady state computation"}},{"before":"a96af6e93ed235ecbc08a0dcae9693ab8753d1fc","after":"598977e98f733f37e01e6e867c974e41d5ed7fc2","ref":"refs/heads/fix_macos14_roadrunner","pushedAt":"2024-05-16T15:21:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"PaulJonasJost","name":"Paul Jonas Jost","path":"/PaulJonasJost","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/70631928?s=80&v=4"},"commit":{"message":"more print","shortMessageHtmlLink":"more print"}},{"before":"47ae8812717dd3599a3b311dee338302e9d56425","after":"a96af6e93ed235ecbc08a0dcae9693ab8753d1fc","ref":"refs/heads/fix_macos14_roadrunner","pushedAt":"2024-05-16T14:30:23.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"PaulJonasJost","name":"Paul Jonas Jost","path":"/PaulJonasJost","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/70631928?s=80&v=4"},"commit":{"message":"always catch stdout","shortMessageHtmlLink":"always catch stdout"}},{"before":"8ac4eeb4bee09f7d6d3c3f62529d3aa67d272227","after":"47ae8812717dd3599a3b311dee338302e9d56425","ref":"refs/heads/fix_macos14_roadrunner","pushedAt":"2024-05-16T13:32:55.000Z","pushType":"push","commitsCount":6,"pusher":{"login":"PaulJonasJost","name":"Paul Jonas Jost","path":"/PaulJonasJost","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/70631928?s=80&v=4"},"commit":{"message":"changed logger to print","shortMessageHtmlLink":"changed logger to print"}},{"before":"3cb86778adf6338d93fdcfca8501fc75fdc46d71","after":"7013eeb8adcb083e56dddc2de45bcbd28f1cba2c","ref":"refs/heads/Some_metadata","pushedAt":"2024-05-16T13:10:53.000Z","pushType":"push","commitsCount":6,"pusher":{"login":"PaulJonasJost","name":"Paul Jonas Jost","path":"/PaulJonasJost","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/70631928?s=80&v=4"},"commit":{"message":"Merge branch 'develop' into Some_metadata","shortMessageHtmlLink":"Merge branch 'develop' into Some_metadata"}},{"before":"0056edde4c9c72c578dc13a6b45c32952f115628","after":"61c62ef9893f20fe441a0190aa49aca6433ecee3","ref":"refs/heads/example_history_usage","pushedAt":"2024-05-16T13:03:57.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"PaulJonasJost","name":"Paul Jonas Jost","path":"/PaulJonasJost","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/70631928?s=80&v=4"},"commit":{"message":"Apply suggestions from code review","shortMessageHtmlLink":"Apply suggestions from code review"}},{"before":"a9efc1447f4f34c64166d9a8a9e8e51663bce9e0","after":"bdd8873567f0ba323da379edd49f3fcacb10bf6c","ref":"refs/heads/variational_inference","pushedAt":"2024-05-16T12:51:59.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"vwiela","name":"Vincent Wieland","path":"/vwiela","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/90847066?s=80&v=4"},"commit":{"message":"Merge branch 'develop' into variational_inference","shortMessageHtmlLink":"Merge branch 'develop' into variational_inference"}},{"before":"d5fde03fd3bdc8855c3641d0c9f92d0ca3795294","after":"7fe40bace62a41bf4391be018aadc17370d08316","ref":"refs/heads/develop","pushedAt":"2024-05-16T12:51:06.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"vwiela","name":"Vincent Wieland","path":"/vwiela","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/90847066?s=80&v=4"},"commit":{"message":"Update `test_thermodynamic_integration` (#1385)\n\n* Lowered samples, removed comparison of two different amount of chains\r\n\r\n* Removed even argument, due to scipy wanting to go for \"simpson\" and depracating \"even\"\r\n\r\n* Removed warning for `test_thermodynamic_integration`\r\n\r\n---------\r\n\r\nCo-authored-by: Jonas Arruda <69197639+arrjon@users.noreply.github.com>\r\nCo-authored-by: Dilan Pathirana <59329744+dilpath@users.noreply.github.com>","shortMessageHtmlLink":"Update test_thermodynamic_integration (#1385)"}},{"before":"98f7258f4c8743d99cfe1427acd2ed3e3252acde","after":"a9efc1447f4f34c64166d9a8a9e8e51663bce9e0","ref":"refs/heads/variational_inference","pushedAt":"2024-05-16T07:37:16.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"arrjon","name":"Jonas Arruda","path":"/arrjon","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69197639?s=80&v=4"},"commit":{"message":"Merge branch 'develop' into variational_inference","shortMessageHtmlLink":"Merge branch 'develop' into variational_inference"}},{"before":"c22ede8596ac749326cbe0fc2238233ef7cc7dcb","after":"14af5f2ed5eabfa3be6c6fd42812b32bc5273aba","ref":"refs/heads/mac_timeout","pushedAt":"2024-05-16T07:36:59.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"arrjon","name":"Jonas Arruda","path":"/arrjon","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69197639?s=80&v=4"},"commit":{"message":"Merge branch 'develop' into mac_timeout","shortMessageHtmlLink":"Merge branch 'develop' into mac_timeout"}},{"before":"e555ef260ef68ec26e1f0ce174cb39add1fc08ee","after":null,"ref":"refs/heads/sampling_fixed","pushedAt":"2024-05-16T07:36:37.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"arrjon","name":"Jonas Arruda","path":"/arrjon","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69197639?s=80&v=4"}},{"before":"049493cac5a1374130da66d675afd66fda21da82","after":"d5fde03fd3bdc8855c3641d0c9f92d0ca3795294","ref":"refs/heads/develop","pushedAt":"2024-05-16T07:36:31.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"arrjon","name":"Jonas Arruda","path":"/arrjon","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69197639?s=80&v=4"},"commit":{"message":"Calling prior in sampling with fixed parameters does not work (#1378)\n\n* fixing call of prior in sampling\r\n\r\n* check if priors not None\r\n\r\n* remove deepcopy","shortMessageHtmlLink":"Calling prior in sampling with fixed parameters does not work (#1378)"}},{"before":"628e31de6e4ab86feaaa377783f7c877141f2361","after":"e555ef260ef68ec26e1f0ce174cb39add1fc08ee","ref":"refs/heads/sampling_fixed","pushedAt":"2024-05-16T07:10:11.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"arrjon","name":"Jonas Arruda","path":"/arrjon","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69197639?s=80&v=4"},"commit":{"message":"Empty-Commit","shortMessageHtmlLink":"Empty-Commit"}},{"before":"304c44677751ed77172d48975c9807a56774a55a","after":"8ac4eeb4bee09f7d6d3c3f62529d3aa67d272227","ref":"refs/heads/fix_macos14_roadrunner","pushedAt":"2024-05-15T14:11:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"PaulJonasJost","name":"Paul Jonas Jost","path":"/PaulJonasJost","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/70631928?s=80&v=4"},"commit":{"message":"catch stdout","shortMessageHtmlLink":"catch stdout"}},{"before":"9687e144f9226c4022dfa24225737db6c953301a","after":"304c44677751ed77172d48975c9807a56774a55a","ref":"refs/heads/fix_macos14_roadrunner","pushedAt":"2024-05-15T12:19:21.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"PaulJonasJost","name":"Paul Jonas Jost","path":"/PaulJonasJost","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/70631928?s=80&v=4"},"commit":{"message":"add logger configuration at the very top","shortMessageHtmlLink":"add logger configuration at the very top"}},{"before":"e4d93c32997f033cdaba9cb6168593ff0b6d4354","after":"9687e144f9226c4022dfa24225737db6c953301a","ref":"refs/heads/fix_macos14_roadrunner","pushedAt":"2024-05-15T12:14:45.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"PaulJonasJost","name":"Paul Jonas Jost","path":"/PaulJonasJost","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/70631928?s=80&v=4"},"commit":{"message":".","shortMessageHtmlLink":"."}},{"before":"cc850f3e35e6968dd05e1079fd86ad7f34983768","after":"e4d93c32997f033cdaba9cb6168593ff0b6d4354","ref":"refs/heads/fix_macos14_roadrunner","pushedAt":"2024-05-15T12:07:45.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"PaulJonasJost","name":"Paul Jonas Jost","path":"/PaulJonasJost","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/70631928?s=80&v=4"},"commit":{"message":"change logger to debug","shortMessageHtmlLink":"change logger to debug"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEVylaXQA","startCursor":null,"endCursor":null}},"title":"Activity · ICB-DCM/pyPESTO"}