Bug Report: Translate gene IDs, FileNotFoundError

[Mitchzw]

Describe the bug

Hey.

I want to translate the ensemble gene names into UniProit names but I get this error:

Traceback (most recent call last):
File "rnalysis/gui/gui.py", line 2554, in redo
File "rnalysis/gui/gui.py", line 2539, in redo
File "rnalysis/gui/gui.py", line 1970, in _apply_function_from_params
File "rnalysis/gui/gui.py", line 1356, in _apply_function_from_params
File "rnalysis/filtering.py", line 392, in translate_gene_ids
File "rnalysis/utils/io.py", line 1039, in map_gene_ids
File "rnalysis/utils/io.py", line 1250, in _get_id_abbreviation_dicts
FileNotFoundError: [Errno 2] No such file or directory: '/var/folders/6h/vt6qqj_n7s983x66mn0q_d9h0000gn/T/_MEI0jL4t9/rnalysis/utils/../data_files/uniprot_dataset_abbreviation_dict.json'

Here is the shortened file I used for this:
head.csv

Is my RNAlysis installation missing data?

Steps To Reproduce

loaded table
general
translate gene IDs

• translate to UniProtKB AC/ID
• translate from Ensembl

(I also tried other translate to and also auto for translate from. As far as I can see the error message is always the same)

Expected behavior

No response

Screenshots

No response

How did you install RNAlysis?

Stand-alone app

RNAlysis version

3.6.0

Operating system

MacOS 12.7

Additional context

No response

[GuyTeichman]

Hi,
please try running this again using the latest version of RNAlysis (V3.11.0) and let me know if it works.

Best,
Guy.