Version 0.3.4

Version 0.3.4 of NucleoATAC, available on PyPi.

v0.3.1

Updated occupancy function further compared to v0.3.0 to improve performance over variety of different observed fragment size distributions.

v0.3.0: Merge branch 'gamma' to change NFR fit to be based on gamma distribut…

Change to occupancy function to be more robust. Several bugfixes.
[v0.3.1 should have improved occupancy function compared to this version]

v0.2.1

Added calculation of confidence interval with occupancy (required some changes in method for calculating occupancy). Also added in method for merging occupancy peaks with

v0.1.3

Fixed a few bugs relative to previous release.

NucleoATAC-v0.1.2

Fixed some bugs, problems with install dependencies (new version of Cython required).

Initial release

Very preliminary release. Installation with setup.py won't actually work! But can use if add NucleoATAC folder to $PYTHONPATH and bin folder to $PATH manually