New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
<< OpenBabel error >> #31
Comments
Hi @icamps, I just tried installing openbabel and python-openbabel using apt on a clean Ubuntu 19.04: apt install openbabel python-openbabel and afterwards I ran the following from the terminal: $ python -c "import openbabel; print openbabel"
<module 'openbabel' from '/usr/lib/python2.7/dist-packages/openbabel.pyc'> So to me it looks like you installed FragIt using python3 on Ubuntu 19.04 and then installed openbabel and python-bindings using apt which defaults to python 2.7. So you need to remove your installation of fragit and reinstall it using python2.7. all the best Casper |
Hi @cstein Thank you very much for your help. I figure out how to install/run Fragit: I added "#!/usr/bin/python" to files /usr/local/bin/fragit-conf and /usr/local/bin/fragit, when I run python, it returns Python 2.7.16 (default, Apr 6 2019, 01:42:57) so it is Python 2.7, right? Now, I am following the steps in the Wiki (How to use Fragit?) but I am getting the following output file (attached) with this message: Traceback (most recent call last): It is about OpenBabel? Also: how can I uninstall FragIt? Regards, Camps |
Hello,
I installed OpenBabel and python-openbabel using apt (Ubuntu 19.04).
The problem is that after installing FragIt, I am getting the following error messages:
Error: OpenBabel could not be loaded.
Please make sure OpenBabel has been installed with python bindings.
But Babel and Babel-GUI are working fine when I call them from the command line.
Any idea how to make FragIt to see OpenBabel?
Regards,
The text was updated successfully, but these errors were encountered: