Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

install errors in debian 10 (debian:buster) #184

Open
marcoblancas opened this issue Jul 31, 2019 · 1 comment
Open

install errors in debian 10 (debian:buster) #184

marcoblancas opened this issue Jul 31, 2019 · 1 comment

Comments

@marcoblancas
Copy link

Please, help installing mdk in Debian 10. Some errors related with mysql (now mariadb in Debian 10).

I tried to change some packages in the apt-get install but not sure what I'm doing wrong.

root@1f982efe8590:/# cat /etc/issue
Debian GNU/Linux 10 \n \l

root@1f982efe8590:/# apt-get install python-pip libmysqlclient-dev libpq-dev python-dev unixodbc-dev
Leyendo lista de paquetes... Hecho
Creando árbol de dependencias       
Leyendo la información de estado... Hecho
El paquete libmysqlclient-dev no está disponible, pero algún otro paquete hace referencia
a él. Esto puede significar que el paquete falta, está obsoleto o sólo se
encuentra disponible desde alguna otra fuente
Sin embargo, los siguientes paquetes lo reemplazan:
  libmariadb-dev-compat libmariadb-dev

E: El paquete «libmysqlclient-dev» no tiene un candidato para la instalación

root@1f982efe8590:/# apt-get install python-pip libmariadb-dev-compat libmariadb-dev libpq-dev python-dev unixodbc-dev

...


root@1f982efe8590:/# pip install moodle-sdk
Collecting moodle-sdk
  Downloading https://files.pythonhosted.org/packages/5b/d6/5b2ad3fb574e67c666700448ac93c1c52e59f1958b56d939770f4411815a/moodle-sdk-1.7.4.tar.gz (102kB)
    100% |████████████████████████████████| 112kB 2.7MB/s 
Collecting MySQL-python>=1.2.3 (from moodle-sdk)
  Downloading https://files.pythonhosted.org/packages/a5/e9/51b544da85a36a68debe7a7091f068d802fc515a3a202652828c73453cad/MySQL-python-1.2.5.zip (108kB)
    100% |████████████████████████████████| 112kB 5.2MB/s 
Collecting jenkinsapi>=0.3.2 (from moodle-sdk)
  Downloading https://files.pythonhosted.org/packages/de/42/d966fff11505493e27676d3171f5955bedf8f3c6cdb26a72c18210974319/jenkinsapi-0.3.9-py2.py3-none-any.whl (130kB)
    100% |████████████████████████████████| 133kB 4.7MB/s 
Requirement already satisfied: keyring>=3.5 in /usr/lib/python2.7/dist-packages (from moodle-sdk) (17.1.1)
Collecting psycopg2>=2.4.5 (from moodle-sdk)
  Downloading https://files.pythonhosted.org/packages/5c/1c/6997288da181277a0c29bc39a5f9143ff20b8c99f2a7d059cfb55163e165/psycopg2-2.8.3.tar.gz (377kB)
    100% |████████████████████████████████| 378kB 2.3MB/s 
Collecting pyodbc>=4.0.21 (from moodle-sdk)
  Downloading https://files.pythonhosted.org/packages/75/29/aa190749bac37ede0f11a68a75e7055254699c11572bd94213f1163dfd8f/pyodbc-4.0.27.tar.gz (242kB)
    100% |████████████████████████████████| 245kB 3.4MB/s 
Collecting requests>=2.3.0 (from moodle-sdk)
  Downloading https://files.pythonhosted.org/packages/51/bd/23c926cd341ea6b7dd0b2a00aba99ae0f828be89d72b2190f27c11d4b7fb/requests-2.22.0-py2.py3-none-any.whl (57kB)
    100% |████████████████████████████████| 61kB 5.0MB/s 
Collecting watchdog>=0.8.0 (from moodle-sdk)
  Downloading https://files.pythonhosted.org/packages/bb/e3/5a55d48a29300160779f0a0d2776d17c1b762a2039b36de528b093b87d5b/watchdog-0.9.0.tar.gz (85kB)
    100% |████████████████████████████████| 92kB 9.5MB/s 
Collecting pytz>=2014.4 (from jenkinsapi>=0.3.2->moodle-sdk)
  Downloading https://files.pythonhosted.org/packages/87/76/46d697698a143e05f77bec5a526bf4e56a0be61d63425b68f4ba553b51f2/pytz-2019.2-py2.py3-none-any.whl (508kB)
    100% |████████████████████████████████| 512kB 2.1MB/s 
Requirement already satisfied: six>=1.10.0 in /usr/lib/python2.7/dist-packages (from jenkinsapi>=0.3.2->moodle-sdk) (1.12.0)
Requirement already satisfied: secretstorage<3 in /usr/lib/python2.7/dist-packages (from keyring>=3.5->moodle-sdk) (2.3.1)
Collecting idna<2.9,>=2.5 (from requests>=2.3.0->moodle-sdk)
  Downloading https://files.pythonhosted.org/packages/14/2c/cd551d81dbe15200be1cf41cd03869a46fe7226e7450af7a6545bfc474c9/idna-2.8-py2.py3-none-any.whl (58kB)
    100% |████████████████████████████████| 61kB 7.8MB/s 
Collecting chardet<3.1.0,>=3.0.2 (from requests>=2.3.0->moodle-sdk)
  Downloading https://files.pythonhosted.org/packages/bc/a9/01ffebfb562e4274b6487b4bb1ddec7ca55ec7510b22e4c51f14098443b8/chardet-3.0.4-py2.py3-none-any.whl (133kB)
    100% |████████████████████████████████| 143kB 5.2MB/s 
Collecting certifi>=2017.4.17 (from requests>=2.3.0->moodle-sdk)
  Downloading https://files.pythonhosted.org/packages/69/1b/b853c7a9d4f6a6d00749e94eb6f3a041e342a885b87340b79c1ef73e3a78/certifi-2019.6.16-py2.py3-none-any.whl (157kB)
    100% |████████████████████████████████| 163kB 4.6MB/s 
Collecting urllib3!=1.25.0,!=1.25.1,<1.26,>=1.21.1 (from requests>=2.3.0->moodle-sdk)
  Downloading https://files.pythonhosted.org/packages/e6/60/247f23a7121ae632d62811ba7f273d0e58972d75e58a94d329d51550a47d/urllib3-1.25.3-py2.py3-none-any.whl (150kB)
    100% |████████████████████████████████| 153kB 4.7MB/s 
Collecting PyYAML>=3.10 (from watchdog>=0.8.0->moodle-sdk)
  Downloading https://files.pythonhosted.org/packages/e3/e8/b3212641ee2718d556df0f23f78de8303f068fe29cdaa7a91018849582fe/PyYAML-5.1.2.tar.gz (265kB)
    100% |████████████████████████████████| 266kB 2.9MB/s 
Collecting argh>=0.24.1 (from watchdog>=0.8.0->moodle-sdk)
  Downloading https://files.pythonhosted.org/packages/06/1c/e667a7126f0b84aaa1c56844337bf0ac12445d1beb9c8a6199a7314944bf/argh-0.26.2-py2.py3-none-any.whl
Collecting pathtools>=0.1.1 (from watchdog>=0.8.0->moodle-sdk)
  Downloading https://files.pythonhosted.org/packages/e7/7f/470d6fcdf23f9f3518f6b0b76be9df16dcc8630ad409947f8be2eb0ed13a/pathtools-0.1.2.tar.gz
Building wheels for collected packages: moodle-sdk, MySQL-python, psycopg2, pyodbc, watchdog, PyYAML, pathtools
  Running setup.py bdist_wheel for moodle-sdk ... done
  Stored in directory: /root/.cache/pip/wheels/e0/da/a2/7392dbef251aa89c41c0960f778fda67437c677c8b745bede5
  Running setup.py bdist_wheel for MySQL-python ... error
  Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-install-UB9qiv/MySQL-python/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" bdist_wheel -d /tmp/pip-wheel-puiLc1 --python-tag cp27:
  running bdist_wheel
  running build
  running build_py
  creating build
  creating build/lib.linux-x86_64-2.7
  copying _mysql_exceptions.py -> build/lib.linux-x86_64-2.7
  creating build/lib.linux-x86_64-2.7/MySQLdb
  copying MySQLdb/__init__.py -> build/lib.linux-x86_64-2.7/MySQLdb
  copying MySQLdb/converters.py -> build/lib.linux-x86_64-2.7/MySQLdb
  copying MySQLdb/connections.py -> build/lib.linux-x86_64-2.7/MySQLdb
  copying MySQLdb/cursors.py -> build/lib.linux-x86_64-2.7/MySQLdb
  copying MySQLdb/release.py -> build/lib.linux-x86_64-2.7/MySQLdb
  copying MySQLdb/times.py -> build/lib.linux-x86_64-2.7/MySQLdb
  creating build/lib.linux-x86_64-2.7/MySQLdb/constants
  copying MySQLdb/constants/__init__.py -> build/lib.linux-x86_64-2.7/MySQLdb/constants
  copying MySQLdb/constants/CR.py -> build/lib.linux-x86_64-2.7/MySQLdb/constants
  copying MySQLdb/constants/FIELD_TYPE.py -> build/lib.linux-x86_64-2.7/MySQLdb/constants
  copying MySQLdb/constants/ER.py -> build/lib.linux-x86_64-2.7/MySQLdb/constants
  copying MySQLdb/constants/FLAG.py -> build/lib.linux-x86_64-2.7/MySQLdb/constants
  copying MySQLdb/constants/REFRESH.py -> build/lib.linux-x86_64-2.7/MySQLdb/constants
  copying MySQLdb/constants/CLIENT.py -> build/lib.linux-x86_64-2.7/MySQLdb/constants
  running build_ext
  building '_mysql' extension
  creating build/temp.linux-x86_64-2.7
  x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-IbFBHb/python2.7-2.7.16=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Dversion_info=(1,2,5,'final',1) -D__version__=1.2.5 -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include/python2.7 -c _mysql.c -o build/temp.linux-x86_64-2.7/_mysql.o
  In file included from _mysql.c:44:
  /usr/include/mariadb/my_config.h:3:2: warning: #warning This file should not be included by clients, include only <mysql.h> [-Wcpp]
   #warning This file should not be included by clients, include only <mysql.h>
    ^~~~~~~
  In file included from _mysql.c:46:
  /usr/include/mariadb/mysql.h:440:3: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
     MYSQL_CLIENT_PLUGIN_HEADER
     ^~~~~~~~~~~~~~~~~~~~~~~~~~
  _mysql.c: In function ‘_mysql_ConnectionObject_ping’:
  _mysql.c:2005:41: error: ‘MYSQL’ {aka ‘struct st_mysql’} has no member named ‘reconnect’
    if ( reconnect != -1 ) self->connection.reconnect = reconnect;
                                           ^
  error: command 'x86_64-linux-gnu-gcc' failed with exit status 1
  
  ----------------------------------------
  Failed building wheel for MySQL-python
  Running setup.py clean for MySQL-python
  Running setup.py bdist_wheel for psycopg2 ... done
  Stored in directory: /root/.cache/pip/wheels/48/06/67/475967017d99b988421b87bf7ee5fad0dad789dc349561786b
  Running setup.py bdist_wheel for pyodbc ... done
  Stored in directory: /root/.cache/pip/wheels/87/b7/78/0740a2ed98bfe463525ad42d535370e34141c5d36b2d00dcaf
  Running setup.py bdist_wheel for watchdog ... done
  Stored in directory: /root/.cache/pip/wheels/61/1d/d0/04cfe495619be2095eb8d89a31c42adb4e42b76495bc8f784c
  Running setup.py bdist_wheel for PyYAML ... done
  Stored in directory: /root/.cache/pip/wheels/d9/45/dd/65f0b38450c47cf7e5312883deb97d065e030c5cca0a365030
  Running setup.py bdist_wheel for pathtools ... done
  Stored in directory: /root/.cache/pip/wheels/0b/04/79/c3b0c3a0266a3cb4376da31e5bfe8bba0c489246968a68e843
Successfully built moodle-sdk psycopg2 pyodbc watchdog PyYAML pathtools
Failed to build MySQL-python
Installing collected packages: MySQL-python, pytz, idna, chardet, certifi, urllib3, requests, jenkinsapi, psycopg2, pyodbc, PyYAML, argh, pathtools, watchdog, moodle-sdk
  Running setup.py install for MySQL-python ... error
    Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-install-UB9qiv/MySQL-python/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" install --record /tmp/pip-record-6a0Iq3/install-record.txt --single-version-externally-managed --compile:
    running install
    running build
    running build_py
    creating build
    creating build/lib.linux-x86_64-2.7
    copying _mysql_exceptions.py -> build/lib.linux-x86_64-2.7
    creating build/lib.linux-x86_64-2.7/MySQLdb
    copying MySQLdb/__init__.py -> build/lib.linux-x86_64-2.7/MySQLdb
    copying MySQLdb/converters.py -> build/lib.linux-x86_64-2.7/MySQLdb
    copying MySQLdb/connections.py -> build/lib.linux-x86_64-2.7/MySQLdb
    copying MySQLdb/cursors.py -> build/lib.linux-x86_64-2.7/MySQLdb
    copying MySQLdb/release.py -> build/lib.linux-x86_64-2.7/MySQLdb
    copying MySQLdb/times.py -> build/lib.linux-x86_64-2.7/MySQLdb
    creating build/lib.linux-x86_64-2.7/MySQLdb/constants
    copying MySQLdb/constants/__init__.py -> build/lib.linux-x86_64-2.7/MySQLdb/constants
    copying MySQLdb/constants/CR.py -> build/lib.linux-x86_64-2.7/MySQLdb/constants
    copying MySQLdb/constants/FIELD_TYPE.py -> build/lib.linux-x86_64-2.7/MySQLdb/constants
    copying MySQLdb/constants/ER.py -> build/lib.linux-x86_64-2.7/MySQLdb/constants
    copying MySQLdb/constants/FLAG.py -> build/lib.linux-x86_64-2.7/MySQLdb/constants
    copying MySQLdb/constants/REFRESH.py -> build/lib.linux-x86_64-2.7/MySQLdb/constants
    copying MySQLdb/constants/CLIENT.py -> build/lib.linux-x86_64-2.7/MySQLdb/constants
    running build_ext
    building '_mysql' extension
    creating build/temp.linux-x86_64-2.7
    x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-IbFBHb/python2.7-2.7.16=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Dversion_info=(1,2,5,'final',1) -D__version__=1.2.5 -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include/python2.7 -c _mysql.c -o build/temp.linux-x86_64-2.7/_mysql.o
    In file included from _mysql.c:44:
    /usr/include/mariadb/my_config.h:3:2: warning: #warning This file should not be included by clients, include only <mysql.h> [-Wcpp]
     #warning This file should not be included by clients, include only <mysql.h>
      ^~~~~~~
    In file included from _mysql.c:46:
    /usr/include/mariadb/mysql.h:440:3: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
       MYSQL_CLIENT_PLUGIN_HEADER
       ^~~~~~~~~~~~~~~~~~~~~~~~~~
    _mysql.c: In function ‘_mysql_ConnectionObject_ping’:
    _mysql.c:2005:41: error: ‘MYSQL’ {aka ‘struct st_mysql’} has no member named ‘reconnect’
      if ( reconnect != -1 ) self->connection.reconnect = reconnect;
                                             ^
    error: command 'x86_64-linux-gnu-gcc' failed with exit status 1
    
    ----------------------------------------
Command "/usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-install-UB9qiv/MySQL-python/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" install --record /tmp/pip-record-6a0Iq3/install-record.txt --single-version-externally-managed --compile" failed with error code 1 in /tmp/pip-install-UB9qiv/MySQL-python/
@ericlentz
Copy link

Answer to this problem is here: DefectDojo/django-DefectDojo#407. Just add the reconnect member.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
2 participants
@ericlentz @marcoblancas