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Session-specific analysis mask #1701

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HenkMutsaerts opened this issue Apr 26, 2024 · 0 comments
Open
1 task

Session-specific analysis mask #1701

HenkMutsaerts opened this issue Apr 26, 2024 · 0 comments
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Description

Currently, we create a single population-specific analysis mask. This can give problems e.g., if one run has more slices includes in the FoV than another. This is the case e.g., for Excersion-VCI, where the first run is a whole-brain single-PLD PCASL scan and the second run a Look-Locker multi-PLD PASL scan, with half of the FoV included.

Tasks

  • The population templates can be ran run-wise, e.g.:
    xASL_wrp_CreatePopulationTemplates(x, 1, {'session'}, {'FoV', 'FoV', 1;'MaskSusceptibility','MaskSusceptibility',1;'MaskVascular','MaskVascular',1})
    Perhaps, we need to default this with multiple runs?

How to test

Optional: insert description about how to test the code changes here

Release notes

Required: summarize the changes for the release notes here

@HenkMutsaerts HenkMutsaerts added the bug Something isn't working label Apr 26, 2024
@HenkMutsaerts HenkMutsaerts added this to the Release 1.12.0 milestone Apr 26, 2024
@HenkMutsaerts HenkMutsaerts self-assigned this Apr 26, 2024
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