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Short Read Mapper #22

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TransGirlCodes opened this issue Jan 17, 2020 · 0 comments
Open

Short Read Mapper #22

TransGirlCodes opened this issue Jan 17, 2020 · 0 comments
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@TransGirlCodes
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enhancement New feature or request
Projects
Version 1.0 Genome Assembly with Julia
Milestone
The path to v1.0

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@TransGirlCodes
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TransGirlCodes commented Jan 17, 2020 •
edited

We need a process to map short reads to the GenomeGraph.

This should be fairly simple to achieve.
Paired reads are basically very accurate, and so it should be possible to map them reasonably well using an index of unique kmers in the graph.
@TransGirlCodes TransGirlCodes added the enhancement New feature or request label Jan 17, 2020
@TransGirlCodes TransGirlCodes added this to the The path to v1.0 milestone Jan 17, 2020
@TransGirlCodes TransGirlCodes self-assigned this Jan 17, 2020
@TransGirlCodes TransGirlCodes added this to To Do in Genome Assembly with Julia via automation Jan 17, 2020
@TransGirlCodes TransGirlCodes added this to To do in Version 1.0 via automation Jan 17, 2020
@TransGirlCodes TransGirlCodes changed the title Paired Read Mapper Short Read Mapper Jan 20, 2020
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@TransGirlCodes TransGirlCodes

Labels
enhancement New feature or request
Projects
Genome Assembly with Julia
  
To Do
Version 1.0
  
To do
Milestone
The path to v1.0
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@TransGirlCodes