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Publish vamb v4.1.3 #541

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gariem opened this issue Nov 6, 2023 · 4 comments
Open

Publish vamb v4.1.3 #541

gariem opened this issue Nov 6, 2023 · 4 comments

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@gariem
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gariem commented Nov 6, 2023

There is already a recipe for vamb:4.1.3
https://github.com/bioconda/bioconda-recipes/blob/master/recipes/vamb/meta.yaml

However, the corresponding docker and singularity images are still not available at https://biocontainers.pro/registry

Is there any chance that the build/publish jobs can be run so we have the latest versions available? I'm specially interested in the singularity image.

@mboudet
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mboudet commented Nov 6, 2023

There seems to be an issue on the bioconda side of things. The PR was merged, but the conda package was not built.
bioconda/bioconda-recipes#43684
https://anaconda.org/bioconda/vamb

As soon as the package is built, the container should be built too.

@gariem
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gariem commented Nov 6, 2023

Thanks for the reply, can we keep the issue until the new version comes up?

@mboudet
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mboudet commented Nov 7, 2023

No problem. You may wish to create a new issue on the bioconda repository to make sure the problem is known.

@bgruening
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The package was never built. The skip section excluded all Python versions. If we could get this PR bioconda/bioconda-recipes#45266 green and merged.

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