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pyproject.toml
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pyproject.toml
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[build-system]
requires = ["setuptools"]
build-backend = "setuptools.build_meta"
[project]
name = "biapy"
version = "3.4.6"
description = "BiaPy: Bioimage analysis pipelines in Python"
readme = "README.md"
requires-python = ">=3.10"
authors = [{ name = "Daniel Franco-Barranco", email = "daniel.franco@dipc.org" }]
maintainers = [{ name = "Daniel Franco-Barranco", email = "daniel.franco@dipc.org" }]
license = { file = "LICENSE.md" }
classifiers = [
"License :: OSI Approved :: MIT License",
"Environment :: GPU :: NVIDIA CUDA :: 11.8",
"Programming Language :: Python :: 3.10",
]
keywords = ["feed", "reader", "tutorial"]
dependencies = [
"matplotlib>=3.7.1",
"scikit-learn>=1.4.0",
"pydot>=1.4.2",
"yacs>=0.1.8",
"tqdm>=4.66.1",
# "scikit-image>=0.21.0" forces the installation of its latest version in Colab (as there 0.19.3 version is installed).
# This leads to install a higher imageio library version (higher than the 2.31.6 installed in Colab) and force to reload
# the kernel, which is tedious for end users
"scikit-image<=0.21.0,>=0.19.3",
"edt>=2.3.2",
"fill-voids>=2.0.6",
"opencv-python>=4.8.0.76",
"pandas>=1.5.3",
"torchinfo>=1.8.0",
"tensorboardX>=2.6.2.2",
"h5py>=3.9.0",
"zarr>=2.16.1",
"bioimageio.core==0.5.9",
"imagecodecs>=2024.1.1",
"pytorch-msssim>=1.0.0",
"numpy>=1.25.2",
"imageio>=2.31.6",
"imgaug>=0.4.0",
"pooch>=1.8.1",
]
[project.scripts]
biapy = "biapy:main"
[project.urls]
"Homepage" = "https://biapyx.github.io"
"Source" = "https://github.com/BiaPyX/BiaPy"
"Forum" = "https://forum.image.sc/tag/biapy"
[tool.setuptools]
include-package-data = true
[tool.setuptools.packages.find]
include = ['biapy*']