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H&E breast cancer databases - Information on the labels #13

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WolfgangGross opened this issue Nov 23, 2021 · 0 comments
Open

H&E breast cancer databases - Information on the labels #13

WolfgangGross opened this issue Nov 23, 2021 · 0 comments

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@WolfgangGross
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Hi,
I'm looking at the preprocessed dataset of the H&E breast cancer, that you kindly provided. You mentioned, that there are labels assassinated with each patch:
https://github.com/AdalbertoCq/Learning-a-low-dimensional-manifold-of-realcancer-tissue/blob/master/README.md?plain=1#L62

I could find them in the HDF. Can you please provide some information on those labels. I assume index 1 are the survival times (5y) according to Beck et al., because they are binary then the other one is the estrogen receptor information. Is that correct. I was also going though the Beck et al. paper and the supplementary material, but I could not find the labels there. I was there fore wondering where these values are coming from.

Thanks,
Wolfgang

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