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antsrSurf vs. renderSurfaceFunction? #351

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ptsii opened this issue Aug 27, 2021 · 1 comment
Open

antsrSurf vs. renderSurfaceFunction? #351

ptsii opened this issue Aug 27, 2021 · 1 comment

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@ptsii
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ptsii commented Aug 27, 2021

Is your feature request related to a problem? Please describe.
No

Describe the solution you'd like
Just curious what the difference is between antsrSurf vs. renderSurfaceFunction... Perhaps this is the wrong place to ask, but I haven't stumbled across a clear discussion of the two.. Is one an update of the other?

Describe alternatives you've considered
Mango, but its old (latest version seems to be from 2019)

Additional context
None

@stnava
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stnava commented Aug 27, 2021

  • antsrSurf just calls the VTK-enabled ANTs executable --- you would need to have compiled ANTs with VTK to have that ... but it produces very nice surface images eg

  • renderSurfaceFunction uses native R to do similar things and makes pictures like this

so they have different functionality and I use one or the other depending on the task.

plot a color function on an inflated cortical surface? antsrSurf

plot a functional network / graph in a "glass" brain? renderSurfaceFunction or plotBasicNetwork -- same style

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