From 068c762c0c830cef263d105ceb720839aeaf288b Mon Sep 17 00:00:00 2001
From: AndrewCRMartin <andrew@bioinf.org.uk>
Date: Tue, 8 Aug 2017 12:30:23 +0100
Subject: [PATCH] Improved .gitignore

---
 .gitignore                     |  6 +++++
 builddist/pdbgetchain.Makefile | 41 +++++++++++++++++++++++++++++++
 builddist/pdbgetchain.conf     | 45 ++++++++++++++++++++++++++++++++++
 3 files changed, 92 insertions(+)
 create mode 100644 builddist/pdbgetchain.Makefile
 create mode 100644 builddist/pdbgetchain.conf

diff --git a/.gitignore b/.gitignore
index edf6645..380eb33 100644
--- a/.gitignore
+++ b/.gitignore
@@ -1,3 +1,9 @@
+src/Makefile
+*.*~
+src/*.ent
+src/*.xml
+src/bioplib/
+
 # Object files
 *.o
 *.ko
diff --git a/builddist/pdbgetchain.Makefile b/builddist/pdbgetchain.Makefile
new file mode 100644
index 0000000..6ef3185
--- /dev/null
+++ b/builddist/pdbgetchain.Makefile
@@ -0,0 +1,41 @@
+XML    = # -DXML_SUPPORT $(shell xml2-config --cflags)
+XMLLIB = # -lxml2
+#
+GUNZIP = -DGUNZIP_SUPPORT
+#
+CC     = cc
+COPT   = -O3 $(XML) $(GUNZIP)
+LIBS   = $(XMLLIB) -lm
+LFILES = bioplib/BuildConect.o     \
+         bioplib/FreeStringList.o  \
+         bioplib/padterm.o         \
+         bioplib/chindex.o         \
+         bioplib/fsscanf.o         \
+         bioplib/ParseRes.o        \
+         bioplib/ReadPDB.o         \
+         bioplib/WritePDB.o        \
+         bioplib/IndexPDB.o        \
+         bioplib/OpenStdFiles.o    \
+         bioplib/FindResidue.o     \
+         bioplib/FindNextResidue.o \
+         bioplib/StripHPDB.o       \
+         bioplib/CopyPDB.o         \
+         bioplib/StoreString.o     \
+         bioplib/DupePDB.o         \
+         bioplib/filename.o        \
+         bioplib/GetWord.o         \
+         bioplib/array2.o          \
+         bioplib/StructurePDB.o
+
+
+pdbgetchain : pdbgetchain.o $(LFILES)
+	$(CC) $(COPT) -o $@ $< $(LFILES) $(LIBS)
+
+.c.o :
+	$(CC) $(COPT) -c -o $@ $<
+
+clean :
+	\rm -f pdbgetchain.o $(LFILES)
+
+distclean : clean
+	\rm -f pdbgetchain
diff --git a/builddist/pdbgetchain.conf b/builddist/pdbgetchain.conf
new file mode 100644
index 0000000..7ef54dc
--- /dev/null
+++ b/builddist/pdbgetchain.conf
@@ -0,0 +1,45 @@
+version=2.1
+IN=${HOME}/git/bioptools/src
+BIOPLIB=${HOME}/git/bioplib/src
+TARGET=pdbgetchain_V$(version)
+
+FILES
+   pdbgetchain.c
+//
+
+>cp $(BIOPLIB)/../00PART_DISTRIB_README $(TARGET)/bioplib/00README
+>cp $(BIOPLIB)/../COPYING.DOC $(TARGET)/bioplib
+>cp pdbgetchain.Makefile $(TARGET)/Makefile
+
+BIOPFILES
+   BuildConect.c
+   FreeStringList.c  
+   general.h   
+   macros.h        
+   padterm.c   
+   port.h         
+   SysDefs.h
+   chindex.c      
+   fsscanf.c         
+   hash.h      
+   MathType.h      
+   ParseRes.c  
+   ReadPDB.c      
+   WritePDB.c
+   deprecated.h   
+   fsscanf.h         
+   IndexPDB.c  
+   OpenStdFiles.c  
+   pdb.h       
+   StoreString.c
+   FindResidue.c
+   FindNextResidue.c
+   StripHPDB.c
+   CopyPDB.c
+   DupePDB.c
+   StructurePDB.c
+   array.h
+   filename.c
+   GetWord.c
+   array2.c
+//