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I am wondering if anyone else is attempting the RELION 5.0 --tomo workflow on a SLURM cluster? I am running into trouble with getting Napari working. Ultimately I am looking for the best way to use Napari on data that is located on the cluster.
I see in the documentation that it is necessary to use Napari through the local workstation. Currently, I am scping the data from the cluster to my local workstation (ok for the tutorial dataset but we do not have enough storage locally to handle all of the data we have generated).
Is this in fact the way that people are handling this situation? Is there a simple command that I am missing? I have also looked into using Napari through Jupyter but that would still entail using Napari though the cluster no? \
TIA!
N'Toia
The text was updated successfully, but these errors were encountered:
ntoia
changed the title
Running RELION5 --tomo excluding tilts and particle picking from the cluster
Running RELION5 --tomo excluding tilts and particle picking from a cluster
Apr 26, 2024
ntoia
changed the title
Running RELION5 --tomo excluding tilts and particle picking from a cluster
Running RELION 5.0 --tomo excluding tilts and particle picking from a cluster
Apr 26, 2024
Hello,
I am wondering if anyone else is attempting the RELION 5.0 --tomo workflow on a SLURM cluster? I am running into trouble with getting Napari working. Ultimately I am looking for the best way to use Napari on data that is located on the cluster.
I see in the documentation that it is necessary to use Napari through the local workstation. Currently, I am scping the data from the cluster to my local workstation (ok for the tutorial dataset but we do not have enough storage locally to handle all of the data we have generated).
Is this in fact the way that people are handling this situation? Is there a simple command that I am missing? I have also looked into using Napari through Jupyter but that would still entail using Napari though the cluster no? \
TIA!
N'Toia
The text was updated successfully, but these errors were encountered: