motioncor2 only works properly up to a version 1.5.0 in relion-5.0b (commit 70875e)

[ashkumatov]

Hi,
when using latest versions of MotionCorr2 (1.6.3 or 1.6.4) in relion5 the Total/early/late drifts are not parsed correctly (equals to 0 in the corrected_micrographs.star file).

In individual star files it is -9999
loop_
_rlnMicrographFrameNumber #1
_rlnMicrographShiftX #2
_rlnMicrographShiftY #3
1 -9999.00000 -9999.00000

while averages are generated, i believe it maybe a problem for polishing.
I can use RELION own implementation, but I would also like to do a comparison with MotionCorr2 or even MotionCorr3.

Thanks in advance. Alex

[biochem-fan]

Thank you very much for your report.

I am afraid to say that the MotionCor2 wrapper in RELION is no longer actively maintained. Unless someone sends me a pull request to fix this, it is unlikely that this is repaired.