loupeR in a Docker/Singularity container

[SergejN]

Dear 10X team,
I was wondering whether it would even be legal to include loupeR into a Docker container to run a Nextflow pipeline and output the Cloupe file (from a Seurat object, so the cloupe files generated by CellRanger are not what I mean).
If I interpret the license correctly (point 3), it is not
https://github.com/10XGenomics/loupeR/blob/main/LICENSE

I would be thankful for any advice how this can be solved (if it can). If the only way is to ask the end user of the pipeline to install loupeR and run setup(), then this is the way to go.

thanks a lot!
Sergej

[esiegel]

Maybe it's best to reach out to support@10xgenomics.com .