Core library of the Genome Analysis Toolbox with de-Bruijn graph
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Updated
Jun 1, 2024 - C++
Bioinformatics is an interdisciplinary field that intersects with biology, computer science, mathematics and statistics. It concerns itself with the development and use of methods and software tools for collecting and analyzing biological data.
Core library of the Genome Analysis Toolbox with de-Bruijn graph
Aim to be the bioinformatics repository with more and newer packages
Tutorials on machine learning, artificial intelligence, data science with math explanation and reusable code (in python and R)
Web scraping tools designed to assemble automated daily/monthly literature reviews
NanoRepeat: fast and accurate analysis of Short Tandem Repeats (STRs) from Oxford Nanopore sequencing data
In Press, GigaScience. Web app for post-GWAS/QTL analysis that performs a slew of novel bioinformatics analyses to cross-reference GWAS/QTL mapping results with a host of publicly available rice databases
Data intensive science for everyone.
UCSC Genome Browser source tree. Stable branch: "beta".
Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart)
Conda recipes for the bioconda channel.
simplified cellranger for long-read data
A tool for cell instance aware segmentation in densely packed 3D volumetric images
GCModeller: genomics CAD(Computer Assistant Design) Modeller system in .NET language
R# language is a kind of R liked vectorized language implements on .NET environment for the bioinformatics data analysis
Up-to-date SRA growth size visualization
PAVER: Pathway Analysis Visualization with Embedding Representations
Data Apps & Dashboards for Python. No JavaScript Required.
Official git repository for Biopython (originally converted from CVS)