genomics
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zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)
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Jun 13, 2024 - Python
A short tandem repeat (STR) genotyping and analysis toolkit for long reads
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Jun 13, 2024 - Python
Integrated Pipeline Reports (IPR) API, the reporting API as part of the PORI platform
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Jun 12, 2024 - JavaScript
Bystro genetic analysis (annotation, filtering, statistics)
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Jun 12, 2024 - Python
Grammar of Scalable Linked Interactive Nucleotide Graphics
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Jun 12, 2024 - TypeScript
Official code repository for GATK versions 4 and up
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Jun 12, 2024 - Java
Infectious Disease Sequencing Platform
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Jun 12, 2024 - TypeScript
Extensible specification for representing and uniquely identifying biological sequence variation
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Jun 12, 2024 - Jupyter Notebook
A structural variation pipeline for short-read sequencing
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Jun 12, 2024 - Python
Here you'll find information about my background, expertise, and professional interests. As a physician and bioinformatic programmer, I'm passionate about leveraging my diverse skill set to make meaningful contributions to healthcare, research, and technology.
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Jun 12, 2024
An open-access bioinformatics text
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Jun 12, 2024 - Jupyter Notebook
First steps to Bioinformatics by using Biopython tutorial documentation
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Jun 12, 2024 - Jupyter Notebook
a versatile toolkit for processing and analyzing diverse types of sequence data
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Jun 12, 2024 - Python
Bioinformatics workflows developed for and used on the St. Jude Cloud project.
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Jun 12, 2024 - WDL
🧬 Generative modeling of regulatory DNA sequences with diffusion probabilistic models 💨
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Jun 12, 2024 - Jupyter Notebook
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