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The idea is to create a datalad plugin for boutiques functionality.
Datalad has a lot of useful functionality already, specifically: rerunning commands or scripts and "installing" containers to a dataset.
Boutiques is a tool for annotating an analysis script. It documents the inputs, outputs, and container to run a specific script. It's basically a .json sidecar for your analysis.
The goal of the extension will be to create a datalad boutiques command that can streamline:
installing a boutiques command / container from zenodo to a datalad dataset
call the installed container on data within the dataset
hi @bcmcpher can you provide the content and/or figure for this project to be added to Brainhack Proceeding 2023 by 15th May? Also, please don't forget to fill out your team member's details using this form: https://forms.gle/Ku3AVHcXvpUqVVkV7 . Cheers
Boutiques Integration to Datalad
Project Description
The idea is to create a datalad plugin for boutiques functionality.
Datalad has a lot of useful functionality already, specifically: rerunning commands or scripts and "installing" containers to a dataset.
Boutiques is a tool for annotating an analysis script. It documents the inputs, outputs, and container to run a specific script. It's basically a .json sidecar for your analysis.
The goal of the extension will be to create a
datalad boutiques
command that can streamline:Link to the Project
https://github.com/bcmcpher/dl-boutiques
Project lead
Brent McPherson (bcmcpher)
Main Hub
Montreal
Other Hub covered by the leaders
Skills
some experience (or interest in learning the mechanics of)
Short name for the Discord chat channel (~15 chars)
dl-boutiques
Please read and follow the OHBM Code of Conduct
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