SulciLab

[BastienCagna]

Title

Sulci Lab: A collaborative tool for sulcal graph labelling

Short description and the goals for the OHBM BrainHack

SulciLab is a web based tool to visualize and manually labellize sulcal graph generated by BrainVISA/Morphologist.
It allows users to create select which graph to visualize, create, copy and share new labelings.

The project is still under basic development and require some user feedback and lot of small bugs should be corrected.

It also include a 3D viewer that could be extracted or replaced to a dependency.

Link to the Project

https://github.com/BastienCagna/sulcilab

Image for the OHBM brainhack website

https://drive.google.com/file/d/1CR0aaMDeAP844HfMT4hEO71Kh5LhDYV5/view?usp=sharing

Project lead

Bastien Cagna (BastienCgn#0797)

Main Hub

Montreal

Other Hub covered by the leaders

• Montreal
• Asia / Pacific
• Europe / Middle East / Africa
• Americas

Skills

Brain Anatomy
Python (Django)
Typescript (React)

Recommended tutorials for new contributors

• Set up a brainhack friendly computing environment
• A introduction to Bash
• Python: Writing a script
• Python: Data analysis with Python
• Python: Visualisation
• Machine learning basics
• BIDS
• Machine learning for neuroimaging
• VCS: Using Git and Github
• VCS: Data management with Datalad
• Virtualization
• High Performance Computing: Oracle cloud resource

Good first issues

Feedback on installation
Report any bug
Enhance the UI or user experience

Twitter summary

SulciLab is a web based tool to visualize and manually labellize sulcal graph generated by BrainVISA/Morphologist.

Short name for the Discord chat channel (~15 chars)

SulciLab-23

Please read and follow the OHBM Code of Conduct

• I agree to follow the OHBM Code of Conduct during the hackathon

[anibalsolon]

hi @BastienCagna can you provide the content and/or figure for this project to be added to Brainhack Proceeding 2023 by 15th May? Also, please remember to fill out your team member's details using this form: https://forms.gle/Ku3AVHcXvpUqVVkV7 . Cheers