A python library to develop genomic data simulators
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Updated
Aug 29, 2023 - Python
A python library to develop genomic data simulators
Collection of several small tools. These tools stay here temporarily and may move to other major repositories as they evolve.
echoverse module: Single- and multi-threaded downloading functions.
Variant annotation and filtration server ALAPY Genome Explorer
Simple tool to merge VCF contacts.
Pipeline to analyze structural variants producing VCF files, then merge them and annotate if in Exon.
htslib for the zig build system
to analyze multiple VCF files and generate a summary of variant metrics
A utility to merge a large number of VCF files incrementally
Predicting true low-VAF SNVs in HPV using triplicate NGS samples and machine learning
Lightweight standalone tool to reduce size of VCF files through filtering
VCF (Variant Call Format) parser optimized for stream processing of large files
A Python GUI program with VCF file manipulation features like Creating, Searching.
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