Colab implementation of a SIR model of disease spread.
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Updated
Jun 9, 2024 - Jupyter Notebook
Colab implementation of a SIR model of disease spread.
CovsirPhy: Python library for COVID-19 analysis with phase-dependent SIR-derived ODE models.
[KDD 2024] Papers about deep learning in epidemic modeling.
Julia package to model epidemic scenarios; a translation of the R(cpp) package {epidemics}.
Compartmental Epidemic Models in Python
A repository to store all of my epidemiological predictive models, including a basic SIR model and it's modifications. This repository also has some other fun models, including the SIInZD model for zombie outbreaks, and a model to predict the population growth of the Diclonious race from Elfen Lied. These models are written in C++ and use OpenMP.
Code for reproducing the results from the preprint "Using early detection data to estimate the date of emergence of an epidemic outbreak".
Meant to explore city and country level the disease (first for COVID-19) dynamics.
Agent-based modelling of pandemics using the Susceptible, Infected, Recovered (SIR) framework.
Vectored GPU based compartmental simulations. Easy to use. With some ABC (Approximate Bayesian Computation) utils
Particle Filter for SEIR models
Trabajo de Fin de Grado de Física 2022
Combine and visualize predictions of international periodically updated COVID-19 pandemic models for the global level and six WHO regions
Old school project about modeling an epidemic in the context of the COVID-19 situation. I choose to simulate an epidemic inside an airport network.
Extensive and accessible COVID-19 data + forecasting for counties and hospitals. 📈
MetaWards disease metapopulation analysis and modelling software. Professional geographical SIR model with a flexible plugin architecture to support complex scenario modelling
Introduction to temporal networks and the activity driven framework with code
Homework and exercises from course Network Dynamics and Learning
Data-driven COVID-19 forecasts and detection of unreported cases
Combine and visualize predictions of international periodically updated COVID-19 pandemic models for countries with subnational level estimates: Canada
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