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672 public repositories
matching this topic...
LesNet (Lesion Net) is an open-source project for AI-based skin lesion detection. It aims to create a reliable tool and foster community involvement in critical AI problems. Contributions are welcome!
Updated
Jun 10, 2024
Python
Web frontend for the Progenetix cancer genome resource
Updated
Jun 10, 2024
JavaScript
Notebooks for working with The Cancer Imaging Archive datasets
Updated
Jun 9, 2024
Jupyter Notebook
Opensource radiation treatment planning system in Python [AAPM'23]
Updated
Jun 8, 2024
Python
Code for the Nature Scientific Reports paper "Pathologist-level classification of histologic patterns on resected lung adenocarcinoma slides with deep neural networks." A sliding window framework for classification of high resolution whole-slide images, often microscopy or histopathology images.
Updated
Jun 7, 2024
Python
Files and code used to generate the CARTAR app to identify and validate CAR targets for cancer treatment.
Updated
Jun 6, 2024
Python
Files and code used to generate the CARTAR app to identify and validate CAR targets for cancer treatment.
Updated
Jun 6, 2024
Python
Detecting mutational signatures via bayesian inference and a reference catalog
Automation scripts and benchmark dataset package for cancer drug prediction deep learning models.
Updated
Jun 5, 2024
Jupyter Notebook
CIViC is an open access, open source, community-driven web resource for Clinical Interpretation of Variants in Cancer
Updated
Jun 7, 2024
TypeScript
EDRN Production Program for the Public/Private Portal (P5)
Updated
Jun 5, 2024
Python
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Updated
Jun 10, 2024
Nextflow
Website to host AmpliconSuite outputs, including AA outputs and resulting focal amplification classifications, such as ecDNA.
Updated
Jun 4, 2024
JavaScript
A simple regular expression based method for measuring telomere length from long-read sequencing
Repository that contains all the data, code and manuscript files for a paper that explores the use of GAMs in biomedical research.
A cancer staging library for Windows applications.
Prostate MRI imaging data analysis
Updated
Jun 3, 2024
Jupyter Notebook
Functions and data relevant to the tutorials published on the WeChat official account MedBioInfoCloud are encapsulated in this R package.
Official code for the paper "A Good Feature Extractor Is All You Need for Weakly Supervised Pathology Slide Classification"
Updated
Jun 1, 2024
Jupyter Notebook
🧠 | Multimodal Integration of Oncology Data System
Updated
May 31, 2024
JavaScript
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